Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14173.1Hypothetical protein. (363 aa)    
Predicted Functional Partners:
ADP14175.1
Sugar transporter family protein 1.
       0.781
ADP14174.1
Hypothetical protein.
 
    
0.776
ADP18305.1
NMT1/THI5 like domain protein.
  
    0.707
ADP14742.1
NMT1/THI5 like family protein 2.
   
    0.660
ADP15637.1
Tat pathway signal sequence domain protein 11.
   
    0.660
ADP16332.1
AMP-binding enzyme family protein 13.
   
    0.617
ADP14172.1
Transposase, IS3/IS911 family protein 1.
       0.551
hctB
Histone H1-like protein HC2.
  
     0.538
ADP14624.1
Arginine/ornithine transport protein AotM.
  
  
 0.535
ADP14286.1
Ring hydroxylating beta subunit family protein 2.
  
     0.508
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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