STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14219.1Glycerate kinase 1; Belongs to the glycerate kinase type-1 family. (380 aa)    
Predicted Functional Partners:
ADP18297.1
Phosphoglycerate mutase family protein.
     
 0.910
ADP15931.1
Aldehyde dehydrogenase family protein 1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.906
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.906
ADP19390.1
Aldehyde dehydrogenase family protein 5; Belongs to the aldehyde dehydrogenase family.
   
 
 0.906
ADP14110.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein 2.
    
  0.903
ADP14619.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein 3.
    
  0.903
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.682
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.668
ADP16968.1
High-affinity gluconate transporter.
 
  
 0.645
ADP14217.1
Integrase family protein 1.
       0.559
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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