STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14270.1Permease family protein 1. (557 aa)    
Predicted Functional Partners:
ADP17061.1
Carbonic anhydrase family protein 2.
 
  
 0.668
acpP2
Acyl carrier protein 2; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.667
cah
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
  
 0.642
ADP13890.1
Carbonic anhydrase family protein 1; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
  
 0.598
ADP16768.1
NADH-ubiquinone/plastoquinone, various chains family protein 2.
  
  
 0.511
rimO
RNA modification enzyme, MiaB family protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
  
    0.496
nuoM
NADH-quinone oxidoreductase subunit M.
  
 
 0.432
ADP19453.1
Transporter, divalent anion:Na+ symporter, DASS family protein.
  
 
 0.426
ADP14269.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 31; Belongs to the LysR transcriptional regulatory family.
     
 0.420
tkt2
Transketolase 2; Belongs to the transketolase family.
 
  
 0.417
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.