STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dppC3Dipeptide transport system permease protein DppC 3. (304 aa)    
Predicted Functional Partners:
ADP14314.1
Binding-protein-dependent transport system inner membrane component family protein 9.
 
 
 0.972
ADP14316.1
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
 0.967
ADP14317.1
Oligopeptide transport ATP-binding protein AppF 2; Belongs to the ABC transporter superfamily.
 
 0.958
ADP14313.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 4.
 
 
 0.932
ADP13515.1
Binding-protein-dependent transport system inner membrane component family protein 4.
 
 
 0.882
ADP15308.1
Binding-protein-dependent transport system inner membrane component family protein 26.
 
 
 0.882
dppB4
Dipeptide transport system permease protein DppB 4.
 
 
 0.879
ADP19804.1
Binding-protein-dependent transport system inner membrane component family protein 67.
 
 
 0.879
ADP13751.1
Binding-protein-dependent transport system inner membrane component family protein 6.
 
 
 0.876
ADP15312.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 3; Belongs to the ABC transporter superfamily.
 
 0.863
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.