STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14356.1Peptidase family M48 family protein 1. (508 aa)    
Predicted Functional Partners:
ADP17177.1
Transcriptional regulatory protein family protein 1.
   
 
 0.876
ADP13861.1
Type I secretion outer membrane protein, TolC family protein 1.
  
  
 0.639
ADP19362.1
Peptidase family M23 family protein 4.
 
 
 
 0.606
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
  
 0.605
galU
UTP-glucose-1-phosphate uridylyltransferase.
       0.579
ADP18890.1
Tetratricopeptide repeat family protein 11.
 
   
 0.538
ADP17460.1
MotA/TolQ/ExbB proton channel family protein 3.
 
    0.527
surA
Chaperone surA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
 
  
 0.525
hflK
HflK protein; HflC and HflK could encode or regulate a protease.
 
     0.502
ppiD
Peptidyl-prolyl cis-trans isomerase.
 
   
 0.489
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.