Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14428.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
ADP14426.1
O-methyl transferase family protein.
 
     0.866
ADP14429.1
Helicase conserved C-terminal domain protein.
 
     0.842
ADP14419.1
Hypothetical protein.
 
     0.736
ADP14403.1
Single-strand binding family protein.
  
     0.722
ADP14399.1
Hypothetical protein.
  
     0.716
ADP14400.1
Hypothetical protein.
  
     0.715
ADP14401.1
Hypothetical protein.
  
     0.710
ADP14398.1
Hypothetical protein.
  
     0.706
ADP14437.1
Hypothetical protein.
 
     0.600
ADP14441.1
Putative membrane protein 10.
 
     0.586
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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