STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14549.1Helix-turn-helix domain, RpiR family protein 1. (290 aa)    
Predicted Functional Partners:
ADP14548.1
D-aminoacylase 1.
 
   
 0.877
ADP14555.1
D-serine deaminase 1.
 
   
 0.803
ADP14547.1
Endoribonuclease L-PSP family protein 4.
 
   
 0.777
ADP14550.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 2; Belongs to the ABC transporter superfamily.
       0.673
ADP14551.1
Oligopeptide transport ATP-binding protein APPD 1; Belongs to the ABC transporter superfamily.
       0.673
ADP14552.1
Binding-protein-dependent transport system inner membrane component family protein 10.
       0.673
ADP14553.1
Binding-protein-dependent transport system inner membrane component family protein 11.
  
    0.658
ADP18181.1
D-serine deaminase 2.
 
   
 0.638
ADP14936.1
Helix-turn-helix domain, RpiR family protein 3.
  
     0.609
ADP13587.1
Rickettsia 17 kDa surface antigen family protein 1.
  
     0.496
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.