Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ADP14555.1D-serine deaminase 1. (423 aa)    
Predicted Functional Partners:
ADP14548.1
D-aminoacylase 1.
 
   
 0.860
ADP14549.1
Helix-turn-helix domain, RpiR family protein 1.
 
   
 0.803
ADP16628.1
N-acyl-D-aspartate deacylase.
 
   
 0.785
ADP14644.1
D-aminoacylase 2.
 
   
 0.754
ADP17515.1
N-acyl-D-glutamate deacylase.
 
   
 0.745
ADP14547.1
Endoribonuclease L-PSP family protein 4.
 
   
 0.675
ADP14554.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 5.
       0.542
ADP14556.1
Carbon-nitrogen hydrolase family protein 1.
       0.535
ADP18983.1
Hypothetical protein.
  
     0.528
ADP17647.1
Amidohydrolase family protein 20.
 
   
 0.451
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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