Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14570.1Bacterial transcriptional regulator family protein 7. (281 aa)    
Predicted Functional Partners:
ADP19518.1
Bacterial transcriptional regulator family protein 37.
  
     0.772
ADP13623.1
Bacterial transcriptional regulator family protein 1.
  
     0.771
ADP17632.1
Bacterial transcriptional regulator family protein 23.
  
     0.771
ADP17841.1
Bacterial transcriptional regulator family protein 24.
  
     0.771
ADP18364.1
Pca regulon regulatory protein 1.
  
     0.770
ADP19344.1
Bacterial transcriptional regulator family protein 35.
  
     0.770
ADP14280.1
Bacterial transcriptional regulator family protein 4.
  
     0.769
ADP18261.1
Bacterial transcriptional regulator family protein 27.
  
     0.769
ADP16890.1
Bacterial transcriptional regulator family protein 20.
  
     0.768
ADP18210.1
Bacterial transcriptional regulator family protein 26.
  
     0.768
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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