Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14585.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
tdcB
Threonine dehydratase catabolic.
       0.749
ADP15175.1
Hypothetical protein.
  
     0.570
ADP15325.1
methylpurine-DNA glycosylase family protein; Belongs to the DNA glycosylase MPG family.
  
     0.563
ADP17888.1
Antibiotic biosynthesis monooxygenase family protein 2.
  
     0.546
ADP18044.1
Hypothetical protein.
  
     0.527
dltD
Poly(glycerophosphate chain) D-alanine transfer protein.
  
     0.504
ADP17124.1
Outer membrane autotransporter barrel domain protein 6.
  
     0.492
ADP16978.1
Outer membrane autotransporter barrel domain protein 5.
  
     0.483
ADP17551.1
Cupin domain protein 5.
  
     0.470
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.445
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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