STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
potAPolyamine ABC transporter, ATP-binding family protein 1; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (378 aa)    
Predicted Functional Partners:
ADP14620.1
Binding-protein-dependent transport system inner membrane component family protein 12.
 
 
 0.880
ADP14621.1
Binding-protein-dependent transport system inner membrane component family protein 13.
 
 
 0.877
ADP18314.1
Binding-protein-dependent transport system inner membrane component family protein 57.
 
 
 0.876
ADP18819.1
Binding-protein-dependent transport system inner membrane component family protein 62.
 
 
 0.876
ADP18315.1
Binding-protein-dependent transport system inner membrane component family protein 58.
 
 
 0.874
ADP18349.1
Binding-protein-dependent transport system inner membrane component family protein 59.
 
 
 0.873
ADP18818.1
Binding-protein-dependent transport system inner membrane component family protein 61.
 
 
 0.872
ADP18160.1
Binding-protein-dependent transport system inner membrane component family protein 53.
 
 
 0.867
ADP18161.1
Binding-protein-dependent transport system inner membrane component family protein 54.
 
 
 0.867
ADP18350.1
Binding-protein-dependent transport system inner membrane component family protein 60.
 
 
 0.863
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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