Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADP14699.1TonB-dependent Receptor Plug domain protein 3. (962 aa)    
Predicted Functional Partners:
ADP14700.1
Heme oxygenase family protein.
 
    0.929
ADP14697.1
FecR family protein 7.
 
  
 0.813
ADP14694.1
FecR family protein 6.
 
  
 0.753
ADP18064.1
FecR family protein 18.
 
  
 0.745
ADP15861.1
FecR family protein 9.
 
  
 0.729
ADP18556.1
FecR family protein 21.
 
  
 0.729
ADP18230.1
FecR family protein 20.
 
  
 0.725
ADP13776.1
FecR family protein 2.
 
  
 0.723
ADP18628.1
FecR family protein 22.
 
  
 0.723
ADP18631.1
FecR family protein 23.
 
  
 0.723
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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