STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14712.1Bacterial regulatory helix-turn-helix protein, AraC family protein 8. (321 aa)    
Predicted Functional Partners:
ADP14709.1
phytanoyl-CoA dioxygenase PhyH family protein 2.
 
    0.580
ADP14710.1
AMP-binding enzyme family protein 4.
     
 0.530
ADP14711.1
phytanoyl-CoA dioxygenase PhyH family protein 3.
  
    0.529
ADP14708.1
Beta-lactamase family protein 1.
     
 0.488
ADP15689.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 12.
 
 
 0.441
ADP13953.1
Ring hydroxylating beta subunit family protein 1.
  
   
 0.437
ADP15452.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 10.
 
 
0.423
ADP13952.1
Rieske [2Fe-2S] domain protein 1.
  
   
 0.404
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.