Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14731.1Short chain dehydrogenase family protein 18. (264 aa)    
Predicted Functional Partners:
ADP14734.1
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 2.
     
 0.774
ADP14732.1
Binding-protein-dependent transport system inner membrane component family protein 19.
       0.773
ADP14733.1
Binding-protein-dependent transport system inner membrane component family protein 20.
       0.773
ADP14735.1
Bacterial regulatory protein, LacI family protein 1.
   
 
 0.752
ADP18608.1
Short chain dehydrogenase family protein 53; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.743
ADP14730.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 45; Belongs to the LysR transcriptional regulatory family.
       0.594
ADP17260.1
Short chain dehydrogenase family protein 40.
 
 
 
 0.562
ADP14738.1
Short chain dehydrogenase family protein 19.
 
    
0.542
ADP14154.1
Short chain dehydrogenase family protein 13.
  
     0.535
ADP19107.1
Short chain dehydrogenase family protein 57.
  
     0.527
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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