STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14744.1Transketolase, C-terminal domain protein 1. (742 aa)    
Predicted Functional Partners:
bkdB
Lipoamide acyltransferase component of branched-chain alpha-keto aciddehydrogenase complex.
 
 0.999
lpdA3
Dihydrolipoyl dehydrogenase 3.
 
 0.999
ADP14746.1
Alpha/beta hydrolase fold family protein 6.
 
 0.998
ADP19228.1
Dehydrogenase E1 component.
  
 0.996
pdhC
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 
 0.994
ADP19230.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.994
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.992
lpdA5
Dihydrolipoyl dehydrogenase 5.
 
 0.992
lpdA2
Dihydrolipoyl dehydrogenase 2.
 
 0.991
lpdA1
Dihydrolipoyl dehydrogenase 1.
 
 0.987
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.