Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP14775.1Transcriptional regulator, TetR family. (207 aa)    
Predicted Functional Partners:
ADP14772.1
Efflux transporter, outer membrane factor lipoprotein, NodT family protein 2.
     
 0.553
ADP14773.1
AcrB/AcrD/AcrF family protein 2; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.552
ADP14774.1
Efflux transporter, RND family, MFP subunit 4; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.551
ADP17307.1
Bacterial regulatory protein, TetR family protein 17.
  
     0.494
ADP16905.1
Bacterial regulatory protein, TetR family protein 15.
  
     0.451
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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