STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amrBMultidrug efflux protein. (1045 aa)    
Predicted Functional Partners:
amrA
Membrane fusion protein AmrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.993
bpeA1
Periplasmic linker protein 1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.971
bpeA3
Periplasmic linker protein 3; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.971
ADP14782.1
Outer membrane protein OprM 1.
 
 0.941
ADP14059.1
Efflux transporter, RND family, MFP subunit 2; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.920
bpeA2
Periplasmic linker protein 2; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.861
ADP19182.1
Efflux transporter, RND family, MFP subunit 8; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.845
ADP16259.1
Efflux transporter, RND family, MFP subunit 6; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.821
ADP16033.1
Outer membrane protein OprM 2.
 
 0.784
ADP17700.1
Outer membrane protein OprM 4; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.774
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.