STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14787.1Bacterial extracellular solute-binding protein, family 5 middle family protein 10. (500 aa)    
Predicted Functional Partners:
ADP15999.1
Binding-protein-dependent transport system inner membrane component family protein 31.
 
 
 0.832
gsiD2
Glutathione transport system permease protein GsiD 2.
 
 
 0.823
ADP14552.1
Binding-protein-dependent transport system inner membrane component family protein 10.
 
 
 0.705
ADP14788.1
Gamma-glutamyltranspeptidase family protein 2.
 
   
 0.670
ADP17019.1
Binding-protein-dependent transport system inner membrane component family protein 45.
 
 
 0.664
ADP14757.1
Binding-protein-dependent transport system inner membrane component family protein 23.
 
 
 0.663
ADP18928.1
Binding-protein-dependent transport system inner membrane component family protein 64.
 
 
 0.661
ADP14926.1
Binding-protein-dependent transport system inner membrane component family protein 25.
 
 
 0.649
gsiD1
Glutathione transport system permease protein GsiD 1.
 
 
 0.648
dppB1
Dipeptide transport system permease protein DppB 1.
 
 
 0.637
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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