STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14822.1Uracil DNA glycosylase superfamily protein. (333 aa)    
Predicted Functional Partners:
rimI
Ribosomal-protein-alanine acetyltransferase.
  
    0.959
ADP16513.1
LD-carboxypeptidase family protein.
  
    0.717
ADP19362.1
Peptidase family M23 family protein 4.
   
   0.705
ompR2
Transcriptional regulatory protein OmpR 2.
       0.688
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.684
ADP14819.1
RisS protein.
       0.611
ADP18578.1
Outer membrane antigenic lipoprotein B.
 
   0.535
ADP19361.1
Carboxy-terminal-processing protease; Belongs to the peptidase S41A family.
  
    0.479
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.451
ADP14818.1
Alkylhydroperoxide reductase domain protein.
       0.447
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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