Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP14869.1D-galactarate dehydratase/altronate hydrolase family protein 3. (515 aa)    
Predicted Functional Partners:
ADP18845.1
D-mannonate oxidoreductase.
 
  
 0.714
ADP13832.1
D-galactarate dehydratase/altronate hydrolase family protein 2.
 
     0.707
garL1
2-dehydro-3-deoxyglucarate aldolase 1; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.675
ADP14868.1
Extra-cytoplasmic solute receptor family protein 30.
       0.597
kdgD
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
    
 0.581
ADP19343.1
Hypothetical protein.
 
   
 0.546
bdhA3
3-hydroxybutyrate dehydrogenase 3.
 
   
 0.506
ADP19124.1
KDPG and KHG aldolase family protein.
 
  
 0.476
ADP15569.1
Dehydratase family protein 1; Belongs to the IlvD/Edd family.
 
   
 0.438
rspA
Starvation-sensing protein RspA.
 
  
 0.423
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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