STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14891.1sigma-E factor regulatory protein. (360 aa)    
Predicted Functional Partners:
ADP14890.1
Anti sigma-E protein RseA, N-terminal domain protein.
 
 
 0.998
rpoE
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.933
mucD1
Serine protease MucD 1; Belongs to the peptidase S1C family.
  
  
 0.782
ADP14888.1
Hypothetical protein.
     
 0.778
fabF
3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
     
 0.715
fliH
Flagellar assembly protein FliH.
  
    0.666
ADP13993.1
Hypothetical protein.
  
     0.643
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
    0.630
ADP15499.1
Transmembrane protein 1.
  
    0.615
ADP19540.1
Hypothetical protein.
  
     0.606
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (20%) [HD]