STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP14921.1Omega-amino acid:pyruvate transaminase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)    
Predicted Functional Partners:
gabT1
4-aminobutyrate transaminase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
0.930
mmsA1
Methylmalonate-semialdehyde dehydrogenase (acylating) 1.
 
  
 0.927
mmsA3
Methylmalonate-semialdehyde dehydrogenase (acylating) 3.
 
  
 0.927
mmsA2
Methylmalonate-semialdehyde dehydrogenase (acylating) 2.
 
  
 0.922
uraD
OHCU decarboxylase.
 
 
 0.920
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.916
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.914
ADP15724.1
N-carbamoyl-L-amino acid hydrolase 1.
  
 
 0.909
ADP15833.1
N-carbamoyl-L-amino acid hydrolase 2.
  
 
 0.909
ADP16411.1
N-carbamyl-L-cysteine amidohydrolase 1.
  
 
 0.909
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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