Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP14961.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
hemF
Coproporphyrinogen 3 oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
 
  
 0.937
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
  
 0.933
hemN1
Oxygen-independent coproporphyrinogen III oxidase 1; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.918
ADP17616.1
Membrane protein-like protein 4.
     
  0.900
ADP14960.1
N-6 adenine-specific DNA methylase 1; Belongs to the methyltransferase superfamily.
       0.785
ADP19565.1
Hydrolase of the alpha/beta superfamily.
 
     0.636
ADP14957.1
RDD family protein 2.
 
     0.592
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
   
 0.580
prpD
2-methylcitrate dehydratase.
       0.544
ADP15712.1
Cytochrome c family protein 5.
  
     0.484
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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