STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14987.1RNA polymerase sigma factor FecI 4; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)    
Predicted Functional Partners:
ADP14988.1
FecR family protein 8.
 
 
 0.995
ADP14991.1
Putative membrane protein 16.
  
    0.912
ADP14993.1
Putative membrane protein 17.
  
  
 0.845
ADP16478.1
FecR family protein 12.
 
 
 0.842
ADP18556.1
FecR family protein 21.
 
 
 0.840
ADP17046.1
FecR family protein 13.
 
 
 0.839
ADP17163.1
FecR family protein 14.
 
 
 0.839
ADP13776.1
FecR family protein 2.
 
 
 0.838
ADP14198.1
FecR family protein 4.
 
 
 0.838
ADP15864.1
FecR family protein 10.
 
 
 0.838
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.