STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaDPhenylacetic acid degradation protein PaaD. (156 aa)    
Predicted Functional Partners:
ADP15101.1
Phenylacetic acid degradation protein PaaC.
 
 
 0.996
paaB
phenylacetate-CoA oxygenase subunit PaaB.
 
 
 0.995
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit.
 
 
 0.995
paaE
phenylacetate-CoA oxygenase/reductase, PaaE subunit.
 
 
 0.994
paaA
phenylacetate-CoA oxygenase, PaaA subunit.
 
 
 0.993
paaF
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.993
paaG2
enoyl-CoA hydratase PaaB 2.
 
 
 0.941
ADP15445.1
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
amiE
Aliphatic amidase.
  
 
  0.903
ADP15328.1
Amidase family protein 4; Belongs to the amidase family.
    
  0.901
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.