STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15134.11,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase. (262 aa)    
Predicted Functional Partners:
ADP15132.1
Catechol 1,2-dioxygenase.
 
  
 0.974
ADP16430.1
Dioxygenase family protein 1.
 
  
 0.930
ADP15785.1
Amidohydrolase family protein 11.
  
 
 0.906
ADP15133.1
Sugar transporter family protein 6.
 
     0.853
ADP18272.1
Short chain dehydrogenase family protein 49; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.709
catB
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.691
catC
Muconolactone delta-isomerase.
 
   
 0.663
pdxA1
4-hydroxythreonine-4-phosphate dehydrogenase 1; Belongs to the PdxA family.
     
 0.565
ADP17672.1
Pyridoxal phosphate biosynthetic protein PdxA family protein; Belongs to the PdxA family.
     
 0.565
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
 
 0.497
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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