STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15300.1Carboxymuconolactone decarboxylase family protein 2. (176 aa)    
Predicted Functional Partners:
ADP19293.1
4-carboxymuconolactone decarboxylase.
 
  
 0.919
ADP17005.1
Carboxymuconolactone decarboxylase family protein 3.
    
 0.907
pcaD1
3-oxoadipate enol-lactonase 1.
   
 
 0.903
pcaD2
3-oxoadipate enol-lactonase 2.
   
 
 0.903
catC
Muconolactone delta-isomerase.
     
  0.900
ADP15301.1
Hypothetical protein.
 
     0.836
ADP15299.1
Extra-cytoplasmic solute receptor family protein 39.
 
     0.809
ADP15298.1
Amidohydrolase family protein 9.
       0.585
ADP13486.1
Hypothetical protein.
 
  
 0.566
ADP16446.1
X-Pro dipeptidyl-peptidase family protein.
  
     0.545
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.