STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15304.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
ADP14524.1
Hypothetical protein.
  
     0.722
ADP15539.1
Membrane protein-like protein 2.
  
     0.695
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
     0.693
ADP14359.1
Zinc-finger domain protein.
  
     0.670
ADP14369.1
Phasin family domain protein.
  
     0.628
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.618
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
  
     0.610
ADP19565.1
Hydrolase of the alpha/beta superfamily.
 
     0.610
ADP17727.1
Spermidine synthase-like protein.
  
     0.603
ADP13588.1
Transcriptional regulatory protein AlgP domain protein.
  
     0.574
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.