STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hyuEHydantoin racemase. (251 aa)    
Predicted Functional Partners:
ADP15307.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 12.
 
     0.636
trzA
N-ethylammeline chlorohydrolase.
 
   
 0.628
ADP14762.1
Polysaccharide deacetylase family protein 2.
 
     0.603
ADP15310.1
Amidohydrolase family protein 10.
 
   
 0.602
ADP14980.1
Polysaccharide deacetylase family protein 5.
 
     0.595
dcaS2
N-carbamoyl-D-amino-acid hydrolase 2.
 
   
 0.590
ADP15305.1
Bacterial regulatory protein, GntR family protein 19.
 
     0.569
dcaS1
N-carbamoyl-D-amino-acid hydrolase 1.
 
   
 0.566
ADP16488.1
Polysaccharide deacetylase family protein 8.
 
     0.559
ADP14769.1
Polysaccharide deacetylase family protein 4.
 
     0.470
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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