STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15322.1Putrescine transport system permease protein PotH. (306 aa)    
Predicted Functional Partners:
ADP15323.1
Binding-protein-dependent transport system inner membrane component family protein 27.
 0.998
potA-2
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.996
potF
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.995
ADP18819.1
Binding-protein-dependent transport system inner membrane component family protein 62.
 
 0.930
ADP18314.1
Binding-protein-dependent transport system inner membrane component family protein 57.
 
 0.923
ADP18161.1
Binding-protein-dependent transport system inner membrane component family protein 54.
 
 0.915
ADP18317.1
ABC transporter family protein 78; Belongs to the ABC transporter superfamily.
 
 
 0.875
potA-3
Polyamine ABC transporter, ATP-binding family protein 2; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.869
ADP15324.1
Hypothetical protein; Belongs to the ArsC family.
       0.855
ADP18348.1
ABC transporter family protein 81; Belongs to the ABC transporter superfamily.
 
 
 0.855
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.