Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP15352.1Bacterial regulatory helix-turn-helix protein, LysR family protein 56; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
ADP15135.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 52; Belongs to the LysR transcriptional regulatory family.
  
     0.772
ADP16604.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 98; Belongs to the LysR transcriptional regulatory family.
  
     0.762
ADP17051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 121; Belongs to the LysR transcriptional regulatory family.
  
     0.760
ADP16626.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 99; Belongs to the LysR transcriptional regulatory family.
  
     0.759
ADP14264.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 30; Belongs to the LysR transcriptional regulatory family.
  
     0.754
ADP19153.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 191; Belongs to the LysR transcriptional regulatory family.
  
     0.746
ADP13875.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 17; Belongs to the LysR transcriptional regulatory family.
  
     0.717
ADP18389.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 166; Belongs to the LysR transcriptional regulatory family.
  
     0.703
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.648
ADP17410.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 133; Belongs to the LysR transcriptional regulatory family.
  
     0.641
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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