STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
recFRecF protein. (594 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.944
ADP16778.1
Calcineurin-like phosphoesterase family protein 7.
  
 0.930
ADP19341.1
Calcineurin-like phosphoesterase family protein 9.
  
 0.930
ADP15364.1
Hypothetical protein.
 
   
 0.892
recQ
ATP-dependent DNA helicase RecQ.
  
 0.824
ADP15359.1
C-5 cytosine-specific DNA methylase 1; Belongs to the N(4)/N(6)-methyltransferase family.
     
 0.798
ADP15365.1
Hypothetical protein.
  
    0.791
ADP15363.1
Exonuclease, RdgC family protein 2; May be involved in recombination. Belongs to the RdgC family.
       0.781
ADP15357.1
Hypothetical protein.
       0.777
ligD1
DNA ligase D 1.
   
 0.776
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.