STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctDC4-dicarboxylate transport transcriptional regulatory protein DctD. (450 aa)    
Predicted Functional Partners:
dctB
C4-dicarboxylate transport sensor protein DctB.
 0.994
rpoN1
RNA polymerase sigma-54 factor 1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.795
rpoN2
RNA polymerase sigma-54 factor 2; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.793
ADP16666.1
His Kinase A phosphoacceptor domain protein 8.
 
 
 0.629
fliM
Flagellar motor switch protein FliM.
  
  
 0.580
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.564
ADP19334.1
Sensory box protein 11.
 
 
 0.563
ADP16587.1
Sensory box protein 6.
 
 
 0.554
ADP16353.1
His Kinase A phosphoacceptor domain protein 7.
 
 
 0.545
cheA2
CheA signal transduction histidine kinase 2.
  
 
 0.544
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.