STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15441.1Bacterial regulatory helix-turn-helix protein, MarR family protein 4. (168 aa)    
Predicted Functional Partners:
ADP15439.1
Multidrug resistance protein A.
 
  
 0.778
ADP15438.1
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
   
 0.681
ADP15442.1
Hypothetical protein.
     
 0.681
ADP15440.1
Efflux transporter, outer membrane factor lipoprotein, NodT family protein 4.
  
  
 0.676
ADP18788.1
Transcriptional regulator OhrR 1.
  
     0.652
ADP15443.1
Triose-phosphate Transporter family protein.
     
 0.519
qor1
Quinone oxidoreductase 1.
       0.413
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.