Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
qor1Quinone oxidoreductase 1. (329 aa)    
Predicted Functional Partners:
ADP15443.1
Triose-phosphate Transporter family protein.
       0.586
ADP15445.1
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.491
ADP15442.1
Hypothetical protein.
       0.459
dkgB
2,5-diketo-D-gluconic acid reductase B.
 
 
 0.447
dkgA
2,5-diketo-d-gluconic acid reductase a.
 
 
 0.439
ADP14903.1
Aldo/keto reductase family protein 2.
 
 
 0.433
ADP15441.1
Bacterial regulatory helix-turn-helix protein, MarR family protein 4.
       0.413
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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