STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15479.1Type IV pilus assembly protein 1. (289 aa)    
Predicted Functional Partners:
ADP15480.1
Lipoprotein 1.
 
  
 0.954
ADP14450.1
Type IV secretory pathway, VirB4 component.
  
  
 0.896
ADP14795.1
Outer membrane porin protein 1.
  
    0.774
ADP18666.1
Outer membrane porin protein 4.
  
    0.766
ADP14349.1
Gram-negative porin family protein 1.
  
    0.757
ADP17777.1
PE-PGRS family protein.
  
     0.757
ADP16178.1
Outer membrane porin protein 2.
  
    0.755
ADP18425.1
Barstar family protein 2.
  
     0.747
ADP14146.1
Hypothetical protein.
  
     0.745
ADP17776.1
POTRA domain, ShlB-type family protein.
  
    0.735
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.