STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15514.1Bacterial regulatory helix-turn-helix protein, LysR family protein 57; Belongs to the LysR transcriptional regulatory family. (310 aa)    
Predicted Functional Partners:
ADP15882.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 73; Belongs to the LysR transcriptional regulatory family.
  
     0.548
ADP17410.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 133; Belongs to the LysR transcriptional regulatory family.
  
     0.538
ADP15515.1
Nucleic-acid-binding protein containing a Zn-ribbon.
  
    0.533
ADP15516.1
Thiolase, C-terminal domain protein 3.
       0.532
ADP14484.1
Transcriptional regulator, LysR family domain protein 1.
  
     0.529
ADP19467.1
HTH-type transcriptional regulator TrpI 2; Belongs to the LysR transcriptional regulatory family.
  
     0.472
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.463
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.463
ADP15517.1
3-oxoadipate CoA-transferase subunit A 1.
       0.423
ADP15518.1
3-oxoadipate CoA-transferase subunit B 1.
       0.423
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.