STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15525.1Integral membrane protein 3. (88 aa)    
Predicted Functional Partners:
ADP15526.1
Hypothetical protein.
 
     0.965
cpaB1
Flp pilus assembly protein CpaB 1.
 
     0.946
ADP15530.1
Bacterial type II and III secretion system family protein 1; Belongs to the bacterial secretin family.
 
     0.919
ADP17774.1
Flp/Fap pilin component family protein.
  
  
  0.913
ADP15531.1
Type II secretion system protein E.
 
     0.886
ADP15532.1
Bacterial type II secretion system protein F domain protein 1.
 
     0.885
ADP15533.1
Bacterial type II secretion system protein F domain protein 2.
 
     0.866
ADP15527.1
TadE-like family protein 2.
       0.855
ADP15528.1
Hypothetical protein.
       0.777
ADP18425.1
Barstar family protein 2.
  
     0.704
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.