STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15532.1Bacterial type II secretion system protein F domain protein 1. (281 aa)    
Predicted Functional Partners:
ADP15533.1
Bacterial type II secretion system protein F domain protein 2.
 
  
 0.992
cpaB1
Flp pilus assembly protein CpaB 1.
 
  
 0.985
ADP15531.1
Type II secretion system protein E.
 
  
 0.984
ADP15530.1
Bacterial type II and III secretion system family protein 1; Belongs to the bacterial secretin family.
 
  
 0.951
ADP15526.1
Hypothetical protein.
 
  
 0.929
cpaE
Pilus assembly protein CpaE.
 
  
 0.928
ADP17767.1
CpaF domain protein.
 
  
 0.916
cpaB2
Flp pilus assembly protein CpaB 2.
 
  
 0.887
ADP15525.1
Integral membrane protein 3.
 
     0.885
ADP17769.1
Bacterial type II and III secretion system family protein 2; Belongs to the bacterial secretin family.
 
  
 0.842
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.