STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15553.1Type I secretion membrane fusion protein, HlyD family protein. (473 aa)    
Predicted Functional Partners:
ADP15554.1
Type I secretion system ATPase family protein.
 
 0.988
ADP15556.1
Type I secretion outer membrane protein, TolC family protein 2.
 
 
 0.969
ADP15555.1
Hypothetical protein.
 
     0.894
ADP15551.1
Hemolysin-type calcium-binding repeat family protein 3.
 
  
 0.869
ADP15548.1
Periplasmic protein-like protein.
 
  
 0.837
ADP15552.1
Bacterial regulatory protein, LuxR family protein 6.
 
  
 0.835
ADP15550.1
Hemolysin-type calcium-binding repeat family protein 2.
 
  
 0.816
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.807
ADP15549.1
Hemolysin-type calcium-binding repeat family protein 1.
 
  
 0.800
cvaB
Colicin V processing peptidase.
  
 
 0.782
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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