STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15563.1Tat pathway signal sequence domain protein 10; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (403 aa)    
Predicted Functional Partners:
ADP15800.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 4.
 
  
 0.812
ADP15801.1
TRAP transporter, DctM subunit 4.
 
  
 0.810
ADP16943.1
DctM-like transporter family protein.
 
  
 0.796
ADP16944.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 7.
 
  
 0.795
ADP15561.1
LysM domain protein 2.
       0.620
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.620
trpF
N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
       0.587
ADP16945.1
Bacterial extracellular solute-binding protein, family 7 family protein 3; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.540
ADP16707.1
TRAP transporter, DctM subunit 7.
  
    0.452
ADP15793.1
Tat pathway signal sequence domain protein 12; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.404
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.