STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15572.1Tripartite ATP-independent periplasmic transporter, DctQ component family protein 3. (180 aa)    
Predicted Functional Partners:
ADP15571.1
TRAP transporter, DctM subunit 3.
 
 
 0.909
ADP15570.1
TRAP transporter solute receptor, DctP family protein 3.
 
  
 0.907
ADP15316.1
TRAP transporter solute receptor, DctP family protein 1.
 
  
 0.675
ADP16416.1
TRAP transporter solute receptor, DctP family protein 4.
 
  
 0.661
ADP18852.1
TRAP transporter solute receptor, DctP family protein 8.
 
  
 0.660
ADP17630.1
TRAP transporter solute receptor, DctP family protein 7.
 
  
 0.629
ADP15355.1
TRAP transporter solute receptor, DctP family protein 2.
 
  
 0.625
ADP18850.1
TRAP transporter, DctM subunit 11.
 
 
 0.618
ADP17931.1
Bacterial extracellular solute-binding protein, family 7 family protein 4.
 
  
 0.603
ADP17186.1
TRAP transporter solute receptor, DctP family protein 6.
 
  
 0.601
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.