Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
amtAmmonium transporter. (412 aa)    
Predicted Functional Partners:
glnB2
Nitrogen regulatory protein P-II 2; Belongs to the P(II) protein family.
 
 0.997
glnB1
Nitrogen regulatory protein P-II 1.
 
 0.996
ADP13567.1
Ferredoxin-dependent glutamate synthase.
 
  
 0.846
gltD
Glutamate synthase subunit beta.
 
  
 0.798
ADP16666.1
His Kinase A phosphoacceptor domain protein 8.
 
 
 0.796
glnA
Glutamine synthetase, type I.
  
  
 0.790
ADP19773.1
Glutamine synthetase, catalytic domain protein.
  
  
 0.580
glnD
protein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
 
   
 0.573
ADP19359.1
Diguanylate cyclase, GGDEF domain protein 20.
 
      0.536
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.530
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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