STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15608.1SMP-30/Gluconolaconase/LRE-like region family protein 1. (310 aa)    
Predicted Functional Partners:
ADP17008.1
Gluconate 2-dehydrogenase flavoprotein.
 
 
 0.929
ADP17009.1
Gluconate 2-dehydrogenase subunit 3.
  
  
 0.920
ADP15854.1
Sorbitol dehydrogenase.
  
 
 0.906
ADP16791.1
Glucose 1-dehydrogenase.
  
 
 0.906
ADP18026.1
SMP-30/Gluconolaconase/LRE-like region family protein 3.
  
  
 
0.905
ADP15609.1
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain protein 1.
 
    0.703
gadH
Gluconate 2-dehydrogenase cytochrome c subunit.
     
 0.519
ADP15607.1
Spermine/spermidine synthase family protein 2.
       0.460
ADP13400.1
phytanoyl-CoA dioxygenase PhyH family protein 1.
  
    0.436
ADP14711.1
phytanoyl-CoA dioxygenase PhyH family protein 3.
 
    0.425
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.