Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15689.1Bacterial regulatory helix-turn-helix protein, AraC family protein 12. (277 aa)    
Predicted Functional Partners:
ADP15688.1
Proline dehydrogenase family protein.
     
 0.720
ADP19071.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 36.
 
 
 0.664
ADP17553.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 24.
 
 
 0.626
ADP16861.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 17.
 
 
 0.615
ADP13949.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 5.
 
 
 0.608
ADP13533.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 3.
 
 
 0.596
ADP14031.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 6.
 
 
 0.584
ADP19101.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 37.
 
 
 0.573
ADP14188.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 7.
 
 
 0.571
ADP15687.1
Hypothetical protein.
  
  
 0.548
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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