Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP15709.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
nirK
Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family.
 
     0.746
ADP15708.1
Nitric oxide reductase large subunit.
 
   
 0.651
ADP17527.1
Sulfatase family protein 9.
 
   0.623
ADP17154.1
Sulfatase family protein 8.
 
   0.612
ADP17824.1
Sulfatase family protein 10.
 
   0.610
ADP15710.1
Nitrite and nitric oxide reductase regulator.
 
     0.608
ADP19340.1
Sulfatase family protein 13.
 
   0.601
ADP16373.1
Sulfatase family protein 5.
 
   0.594
ADP14667.1
Sulfatase family protein 3.
 
   0.514
ADP16438.1
Hypothetical protein.
 
     0.512
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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