Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP15777.1YadA-like C-terminal domain protein 2. (1790 aa)    
Predicted Functional Partners:
ADP16978.1
Outer membrane autotransporter barrel domain protein 5.
 
   
 0.690
ADP15778.1
Hypothetical protein.
       0.568
ADP19654.1
Hypothetical protein.
  
   
 0.538
ADP19321.1
Major MR/P fimbria protein.
  
   
 0.503
ADP19324.1
Fimbrial family protein 1.
  
   
 0.468
ADP16027.1
Response regulator receiver/ANTAR domain protein 2.
  
     0.454
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
   
 0.454
ADP16961.1
Hypothetical protein.
  
     0.435
ADP16958.1
Hypothetical protein.
  
     0.423
ADP17617.1
Large tegument domain protein.
  
     0.423
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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