Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP15813.1Citrate transporter family protein. (464 aa)    
Predicted Functional Partners:
ADP15814.1
Streptomycin 3''-kinase.
       0.553
ADP15815.1
Major facilitator superfamily protein 21.
     
 0.509
ADP15816.1
Amidase family protein 6.
       0.484
ADP14219.1
Glycerate kinase 1; Belongs to the glycerate kinase type-1 family.
  
  
 0.481
ADP13780.1
Carbohydrate kinase, FGGY family protein 1; Belongs to the FGGY kinase family.
  
  
 0.448
ADP19160.1
Carbohydrate kinase, FGGY family protein 2; Belongs to the FGGY kinase family.
  
  
 0.448
ADP19244.1
Short-chain fatty acids transporter.
 
  
 0.446
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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