STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hutU2Urocanate hydratase 2; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (558 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase.
 
 
 0.996
ADP15823.1
Phenylalanine and histidine ammonia-lyase family protein 1.
 
 
 0.996
hutH
Histidine ammonia-lyase.
 
 0.995
ADP16953.1
Phenylalanine and histidine ammonia-lyase family protein 2.
 
 
 0.994
hutU1
Urocanate hydratase 1; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 
0.905
ADP15830.1
Hypothetical protein.
 
   
 0.832
ADP13512.1
Amidohydrolase family protein 3.
  
  
 0.765
ADP15828.1
CoA-transferase family III family protein 14; Belongs to the CoA-transferase III family.
       0.740
ADP15827.1
acyl-CoA dehydrogenase, middle domain protein 7.
  
  
 0.739
ADP15826.1
acyl-CoA dehydrogenase, N-terminal domain protein 7.
  
  
 0.734
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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