STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15832.1Amidohydrolase family protein 12. (451 aa)    
Predicted Functional Partners:
ADP14762.1
Polysaccharide deacetylase family protein 2.
    
  0.903
ADP14980.1
Polysaccharide deacetylase family protein 5.
    
  0.903
pyrB1
Aspartate carbamoyltransferase 1.
 
 
 0.892
pyrB2
Aspartate carbamoyltransferase 2; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.875
ADP15833.1
N-carbamoyl-L-amino acid hydrolase 2.
 
  
 0.874
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.798
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
  
 0.780
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.779
pyrF
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.777
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.775
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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